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TAPBP Knockout: Reducing HLA Class I for Cardiac Cell Therapy

Bioengineer.org USA
Overview
Researchers in Japan have developed lab-grown heart cells that evade immune detection by knocking out the TAPBP gene using CRISPR-Cas9. These cardiomyocytes show reduced HLA class I expression, avoiding both cytotoxic T cell attacks and natural killer cell responses. This approach simplifies the creation of hypoimmunogenic cell lines, potentially enabling off-the-shelf cardiac therapies for heart failure.
In Depth

Key Findings

Scientists led by Shugo Tohyama of Fujita Health University have created human induced pluripotent stem cell (hiPSC)-derived cardiomyocytes that are largely invisible to the immune system. By disrupting the TAPBP gene, the team significantly reduced the expression of HLA class I proteins on the cell surface. Laboratory tests demonstrated that these edited cells evade attack by cytotoxic T cells without triggering the natural killer (NK) cell response, a common failure in previous hypoimmunogenic cell line attempts.

Technical Details

The researchers used CRISPR-Cas9 to target TAPBP, which encodes tapasin, a molecular chaperone that bridges HLA class I molecules to the TAP transporter in the endoplasmic reticulum. Tapasin is essential for loading high-affinity peptides onto HLA class I molecules. The team electroporated a plasmid encoding TAPBP guide RNA and Cas9 into an HLA haplotype-homozygous hiPSC line from Kyoto University’s Center for iPS Cell Research and Application.

  • Cell Validation: Edited cells retained pluripotency markers NANOG and OCT4, showed a normal karyotype, and maintained standard expansion rates.
  • HLA Expression: While the cells responded to interferon-gamma, HLA class I expression plateaued at a lower level than controls, and HLA class II remained low.
  • Functional Integrity: Cardiomyocytes achieved over 95 percent purity by day 17. They exhibited normal sarcomere organization, mitochondrial distribution, and calcium transient recordings, with beat rates responding normally to the beta-adrenergic agonist isoproterenol.

Background & Context

Heart failure affects over 64 million people globally. While hiPSC-derived cardiomyocytes offer a regenerative alternative to scarce donor hearts, immunological rejection is a primary barrier. Autologous therapies are limited by manufacturing time, while allogeneic “off-the-shelf” cells risk rejection due to the high polymorphism of HLA genes. Previous attempts to remove HLA class I entirely (e.g., via beta-2 microglobulin disruption) often triggered NK cell destruction, requiring complex multi-gene edits to prevent.

Significance & Outlook

By targeting the antigen-processing machinery rather than the HLA genes themselves, this single-gene knockout provides a streamlined path to immune evasion. This reduction in genetic modification lowers off-target risks and simplifies quality control for clinical manufacturing, moving the field closer to scalable, off-the-shelf cardiac cell therapies.

Source: https://bioengineer.org/single-gene-knockout-strips-lab-grown-heart-cells-of-immune-visibility/

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